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Detail Information
Basic information:
Untranslated mRNA: Sponge mRNA
| Related IDs | cncRNA ID | CNC_M_001940 | |
|---|---|---|---|
| Name | CDH5 | ||
| Gene ID | 1003 | ||
| Location | Coordinate(Strand) | 16:66366622-66404784(+) | |
| Locus Sequence | |||
| Organism | Homo sapiens | ||
Evidence support:
| In vivo/vitro assay | In vitro assay and in vivo assay (Mouse) | |
|---|---|---|
| Low-throughput method | Transfection assay;Western blotting;qRT-PCR;Luciferase assay;Wound healing assay;Adhesion assay;Live cell Imaging System;Immunofluorescence assay;In vivo metastasis and immunohistochemical assay | |
| High-throughput method | / | |
| Tissue/Cell | HEK293T cell;MCF-7 cell;MDA-MB-231 cell | |
| Description of experimental evidence | The mRNA was detected by transfection assay, western blotting, qRT-PCR and luciferase assay in MG63 cell and umbilical vein endothelial cell, which can inhibit EMT and metastasis of breast cancer by sponging miR-10b, miR-9 and miR-125b,acting as a decoy for STARD13-targeting microRNAs | |
Orthologues:
| Chimpanzee | ENSPTRG00000008190 |
|---|---|
| Mouse | ENSMUSG00000031871 |
| Drosophila | / |
| Zebrafish | / |
References:
| PMID | 26985770 |
|---|---|
| Description | Here, we identify CDH5, HOXD1, and HOXD10 as putative STARD13 ceRNAs and they display concordant patterns with STARD13 in different metastatic potential breast cancer cell lines and tissues. |
Related Subcelluar Localization:
| Subcelluar Localization | RLID | Link to RNALocate |
|---|---|---|
| cytosol | RLID00049403 | Link to RNALocate |
| exosome | RLID00049404 | Link to RNALocate |
| Cytosol | RLID00000285 | Link to RNALocate |
Related Interactions:
Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).