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Detail Information
Basic information:
Untranslated mRNA: Regulatory mRNA
| Related IDs | cncRNA ID | CNC_M_001412 | |
|---|---|---|---|
| Name | Gap43 | ||
| Gene ID | 29423 | ||
| Location | Coordinate(Strand) | 11:58624198-58717914(+) | |
| Locus Sequence | |||
| Organism | Rattus norvegicus | ||
Evidence support:
| In vivo/vitro assay | In vitro assay | |
|---|---|---|
| Low-throughput method | RNA co-immunoprecipitation;Axonal growth analyse | |
| High-throughput method | / | |
| Tissue/Cell | Neuron;F11 cell;Sciatic nerve explant | |
| Description of experimental evidence | The mRNA was detected by RNA co-immunoprecipitation in F11 cell, which can bind to HuD and ZBP1. | |
Orthologues:
| Human | ENSG00000172020 |
|---|---|
| Chimpanzee | ENSPTRG00000015246 |
| Mouse | ENSMUSG00000047261 |
| Drosophila | / |
| Zebrafish | ENSDARG00000099744 |
References:
| PMID | 23586486 |
|---|---|
| Description | A HuD-ZBP1 ribonucleoprotein complex localizes GAP-43 mRNA into axons through its 3' untranslated region AU-rich regulatory element. |
Related Subcelluar Localization:
| Subcelluar Localization | RLID | Link to RNALocate |
|---|---|---|
| Cell body | RLID00009757 | Link to RNALocate |
| Dendrite | RLID00009758 | Link to RNALocate |
| Dendrite | RLID00009759 | Link to RNALocate |
| Dendrite | RLID00009760 | Link to RNALocate |
| Cell body | RLID00009761 | Link to RNALocate |
| Axon | RLID00009762 | Link to RNALocate |
| Axon | RLID00009763 | Link to RNALocate |
| Axon | RLID00009764 | Link to RNALocate |
Related Interactions:
Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).