Basic information:

Translated ncRNA: circRNA

Related IDs	cncRNA ID	CNC_N_000027
	Name	hsa_circ_28626
	Gene ID	ENSG00000146414
Location	Coordinate(Strand)	6:145864245-145964423(-)
Locus Sequence
Organism	Homo sapiens

Peptide information:

  

Peptide	MKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERRAAILQKWKLWSEL
Peptide length	146

Evidence support:

  

In vivo/vitro assay	In vitro assay
Low-throughput method	Immunoprecipitation;Liquid chromatography-tandem mass spectrometry (LC-MS/MS)
High-throughput method	/
Tissue/Cell	293T cell;U251 cell;U373 cell;Glioblastoma cell;Brain
Description of experimental evidence	The peptide was detected by immunoprecipitation in 293T cell, and the function of peptide was validated in U251 cell, U373 cell, glioblastoma cell and normal brain.

Orthologues:

  

Chimpanzee	ENSPTRG00000018683
Mouse	ENSMUSG00000090112
Drosophila	/
Zebrafish	/

References:

  

PMID	29343848
Description	In this study, we show that a circRNA containing an open reading frame (ORF) driven by the internal ribosome entry site (IRES) can translate a functional protein. The circular form of the SNF2 histone linker PHD RING helicase (SHPRH) gene encodes a novel protein that we termed SHPRH-146aa.