Go Back
Detail Information
Basic information:
Translated ncRNA: lncRNA
| Related IDs | cncRNA ID | CNC_N_000113 | |
|---|---|---|---|
| Name | CASC15 | ||
| Gene ID | ENSG00000272168 | ||
| Location | Coordinate(Strand) | 6:21664185-22654455(+) | |
| Locus Sequence | |||
| Organism | Homo sapiens | ||
Peptide information:
| Peptide | MDGCSPISVSPDVIK | |
|---|---|---|
| Peptide length | 15 | |
Evidence support:
| In vivo/vitro assay | In vitro assay | |
|---|---|---|
| Low-throughput method | / | |
| High-throughput method | Heavy-multiple reaction monitoring (Heavy-MRM) | |
| Tissue/Cell | MHCCLM3 cell;A549 cell;HBE cell;MHCC97H cell;H1299 cell;Hep3B cell | |
| Description of experimental evidence | The peptide was detected by heavy-MRM in human cell lines(A549 cell;H1299 cell;HBE cell;Hep3B cell;MHCC97H cell;MHCCLM3 cell). | |
Orthologues:
| Chimpanzee | / |
|---|---|
| Mouse | / |
| Drosophila | / |
| Zebrafish | / |
References:
| PMID | 31340039 |
|---|---|
| Description | With shotgun proteomics, 308 lncRNA-encoded new proteins were detected. A total of 207 unique peptides of these new proteins were verified by multiple reaction monitoring (MRM) and/or parallel reaction monitoring (PRM), and 10 new proteins were verified by immunoblotting. The data were collected from Supplementary tables. |
Related Subcelluar Localization:
| Subcelluar Localization | RLID | Link to RNALocate |
|---|---|---|
| cytosol | RLID00047089 | Link to RNALocate |
| nucleus | RLID00047090 | Link to RNALocate |
| exosome | RLID00047091 | Link to RNALocate |
Related Diseases:
| Disease | MNDR ID | Link to MNDR |
|---|---|---|
| Stomach cancer | MNDR-E-CIRC-0026 | Link to MNDR |
| Tongue squamous cell carcinoma | MNDR-E-LNC-05230 | Link to MNDR |
| B-acute lymphoblastic leukemia | MNDR-E-LNC-05231 | Link to MNDR |
| Prostate cancer | MNDR-E-LNC-05232 | Link to MNDR |
| Gastric cancer | MNDR-E-LNC-05233 | Link to MNDR |
| Bladder cancer | MNDR-E-LNC-05234 | Link to MNDR |
| Acute leukemia with RUNX1 translocations | MNDR-E-LNC-05235 | Link to MNDR |
| Breast cancer | MNDR-E-LNC-05236 | Link to MNDR |
| Melanoma | MNDR-E-LNC-05237 | Link to MNDR |
| Colon cancer | MNDR-E-LNC-05238 | Link to MNDR |
| Ovarian cancer | MNDR-E-LNC-05239 | Link to MNDR |
| Basal cell carcinoma | MNDR-E-LNC-05240 | Link to MNDR |
| Astrocytoma | MNDR-E-LNC-05241 | Link to MNDR |
| Glioma | MNDR-E-LNC-05242 | Link to MNDR |
| Non small cell lung cancer | MNDR-E-LNC-05243 | Link to MNDR |
| Cervical cancer | MNDR-E-LNC-05244 | Link to MNDR |
| Esophageal cancer | MNDR-E-LNC-05245 | Link to MNDR |
| Hepatocellular carcinoma | MNDR-E-LNC-05246 | Link to MNDR |
| Neuroblastoma | MNDR-E-LNC-05247 | Link to MNDR |
| Acute myeloid leukemia | MNDR-E-LNC-05248 | Link to MNDR |
| Cardiac hypertrophy | MNDR-E-LNC-05249 | Link to MNDR |
| Dysregulated immunity | MNDR-E-LNC-05250 | Link to MNDR |
| Nasopharyngeal cancer | MNDR-E-LNC-05251 | Link to MNDR |
Related Interactions:
Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).