Basic information:

Translated ncRNA: lncRNA

Related IDs	cncRNA ID	CNC_N_000109
	Name	C1RL-AS1
	Gene ID	ENSG00000288352
Location	Coordinate(Strand)	6:7107283-7121732(+)
Notes	It has been re-annotated as protein coding gene now
Locus Sequence
Organism	Homo sapiens

Peptide information:

  

Peptide	MTGRPQEAYNHGRRR
Peptide length	15

Evidence support:

  

In vivo/vitro assay	In vitro assay
Low-throughput method	/
High-throughput method	Multiple reaction monitoring (MRM)
Tissue/Cell	MHCCLM3 cell;A549 cell;HBE cell;MHCC97H cell;H1299 cell;Hep3B cell
Description of experimental evidence	The peptide was detected by MRM in human cell lines(A549 cell;H1299 cell;HBE cell;Hep3B cell;MHCC97H cell;MHCCLM3 cell).

Orthologues:

  

Chimpanzee	/
Mouse	/
Drosophila	/
Zebrafish	/

References:

  

PMID	31340039
Description	With shotgun proteomics, 308 lncRNA-encoded new proteins were detected. A total of 207 unique peptides of these new proteins were verified by multiple reaction monitoring (MRM) and/or parallel reaction monitoring (PRM), and 10 new proteins were verified by immunoblotting. The data were collected from Supplementary tables.

Related Subcelluar Localization:

  

Subcelluar Localization	RLID	Link to RNALocate
chromatin	RLID00046554	Link to RNALocate
nucleolus	RLID00046555	Link to RNALocate
nucleoplasm	RLID00046556	Link to RNALocate
nucleus	RLID00046557	Link to RNALocate
nucleus	RLID00046558	Link to RNALocate
nucleus	RLID00046559	Link to RNALocate
exosome	RLID00046560	Link to RNALocate

Related Diseases:

  

Disease	MNDR ID	Link to MNDR
Esophageal cancer	MNDR-E-LNC-05072	Link to MNDR

Related Interactions:

  

  

   Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).