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Detail Information
Basic information:
Translated ncRNA: lncRNA
| Related IDs | cncRNA ID | CNC_N_000737 | |
|---|---|---|---|
| Name | SOX2-OT | ||
| Gene ID | ENSG00000242808 | ||
| Location | Coordinate(Strand) | 3:180989762-181836880(+) | |
| Locus Sequence | |||
| Organism | Homo sapiens | ||
Peptide information:
| Peptide | IGILATK | |
|---|---|---|
| Peptide length | 7 | |
Evidence support:
| In vivo/vitro assay | In vitro assay | |
|---|---|---|
| Low-throughput method | / | |
| High-throughput method | Liquid chromatography-tandem mass spectrometry (LC-MS/MS) | |
| Tissue/Cell | Ovary | |
| Description of experimental evidence | The peptide was detected by LC-MS/MS in ovary. | |
Orthologues:
| Chimpanzee | / |
|---|---|
| Mouse | / |
| Drosophila | / |
| Zebrafish | / |
References:
| PMID | 24870543 |
|---|---|
| Description | The information assembled from human tissues, cell lines and body fluids enabled estimation of the size of the protein-coding genome, and identified organ-specific proteins and a large number of translated lincRNAs (long intergenic non-coding RNAs).The data were collected from supplementary tables. |
Related Subcelluar Localization:
| Subcelluar Localization | RLID | Link to RNALocate |
|---|---|---|
| nucleus | RLID00076799 | Link to RNALocate |
| exosome | RLID00076800 | Link to RNALocate |
Related Diseases:
| Disease | MNDR ID | Link to MNDR |
|---|---|---|
| Prostate cancer | MNDR-E-LNC-28267 | Link to MNDR |
| Gastric cancer | MNDR-E-LNC-28268 | Link to MNDR |
| Alzheimer disease | MNDR-E-LNC-28269 | Link to MNDR |
| Lung cancer | MNDR-E-LNC-28271 | Link to MNDR |
| Breast cancer | MNDR-E-LNC-28273 | Link to MNDR |
| Cancer | MNDR-E-LNC-28274 | Link to MNDR |
| Squamous cell carcinoma | MNDR-E-LNC-28275 | Link to MNDR |
| Thyroid cancer | MNDR-E-LNC-28276 | Link to MNDR |
| Melanoma | MNDR-E-LNC-28277 | Link to MNDR |
| Syndrome | MNDR-E-LNC-28278 | Link to MNDR |
| Laryngeal cancer | MNDR-E-LNC-28280 | Link to MNDR |
| Laryngeal squamous cell cancer | MNDR-E-LNC-28281 | Link to MNDR |
| Astrocytoma | MNDR-E-LNC-28283 | Link to MNDR |
| Osteosarcoma | MNDR-E-LNC-28286 | Link to MNDR |
| Lung squamous cell carcinoma | MNDR-E-LNC-28288 | Link to MNDR |
| Non-small cell lung carcinoma | MNDR-E-LNC-28289 | Link to MNDR |
| Cholangiocarcinoma | MNDR-E-LNC-28291 | Link to MNDR |
| Esophageal cancer | MNDR-E-LNC-28292 | Link to MNDR |
| Heart failure | MNDR-E-LNC-28293 | Link to MNDR |
| Retinal degeneration | MNDR-E-LNC-28296 | Link to MNDR |
| Colorectal cancer | MNDR-E-LNC-28297 | Link to MNDR |
| Dysregulated immunity | MNDR-E-LNC-28300 | Link to MNDR |
| Nasopharyngeal cancer | MNDR-E-LNC-28301 | Link to MNDR |
Related Interactions:
Notes: You can browse the related interactions in RNAinter by click the above link (since the interaction entries are too much to show here).