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Detail Information


Basic information:


Translated ncRNA: pri-miRNA

Related IDs cncRNA ID CNC_N_000804
Name ath-MIR165a
Gene ID MI0000199
Location Coordinate(Strand) 1:78927-79037(+)
Locus Sequence
Organism Arabidopsis thaliana

Peptide information:

  
Peptide MRVKLFQLRGMLSGSRIL
Peptide length 18

Evidence support:

  
In vivo/vitro assay In vitro assay and in vivo assay (Arabidopsis thaliana)
Low-throughput method Western blotting
High-throughput method /
Tissue/Cell Root
Description of experimental evidence The peptide was detected by western blotting in root, which can enhance the accumulation of their corresponding mature miRNAs, resulting in downregulation of target genes involved in root development.

Orthologues:

  
Human /
Chimpanzee /
Mouse /
Drosophila /
Zebrafish /

References:

  
PMID 25807486
Description The pri-miR171b of Medicago truncatula and the pri-miR165a of Arabidopsis thaliana produce peptides, which we term miPEP171b and miPEP165a, respectively, that enhance the accumulation of their corresponding mature miRNAs, resulting in downregulation of target genes involved in root development. Other miPEPs (ath-MIR160a, ath-MIR164a, ath-MIR319a and ath-MIR169d) such as were collected from extended figures.